struct T_COMPART

Intermediate Compartment object

int idx
Unique ID for this Compartment object
char* name
Pointer to name string used to refer to this object in input file
long Seed
Random seed to use for generating random numbers
int Active
If there is a threshold, the compartment is active
int Spike
If it is active, it has a spike
int nChannels
The number of channels used in this compartment
int* Channels
Array of Channel indexes with length = nChannels
double SPIKE_HALFWIDTH_mean
Average value the spike halfwidth will take
double SPIKE_HALFWIDTH_stdev
Standard deviation applied to the mean
double TAU_MEMBRANE_mean
Average value of the tau membrane
double TAU_MEMBRANE_stdev
standard deviation applied to the mean
double R_MEMBRANE_mean
Average value of the R membrane
double R_MEMBRANE_stdev
Standard deviation from the mean
double THRESHOLD_mean
Average value when threshold takes place
double THRESHOLD_stdev
Standard deviation from the mean
double LEAK_REVERSAL_mean
Average value the leak reversal will start at
double LEAK_REVERSAL_stdev
Standard deviation from the mean
double VMREST
voltage membrane at rest
double VMREST_stdev
standard deviation from the mean
double LEAK_CONDUCTANCE_mean
Average value the leak conductance will take (g_leak)
double LEAK_CONDUCTANCE_stdev
Standard deviation from the mean
double CalciumInternal_mean
Average value Calucium Internal
double CalciumInternal_stdev
Standard deviation from the mean
double CalciumExternal_mean
Average value of Calcium External
double CalciumExternal_stdev
Standard deviation from the mean
double CalciumSpikeIncrement_mean
Average value of Calcium Spike Increment
double CalciumSpikeIncrement_stdev
Standard deviation from the mean
double Calcium_Tau_mean
Average value of Calcium Tau
double Calcium_Tau_stdev
Standard deviation from the mean

Documentation

Intermediate Compartment object. Constructed from temporary compartment object created from parsed input file. Used to create individual compartments in final brain creation stage.
int idx
Unique ID for this Compartment object

char* name
Pointer to name string used to refer to this object in input file

long Seed
Random seed to use for generating random numbers

int Active
If there is a threshold, the compartment is active

int Spike
If it is active, it has a spike

int nChannels
The number of channels used in this compartment

int* Channels
Array of Channel indexes with length = nChannels. Indexes refers to the T_CHANNEL array inside the Arrays object.

double SPIKE_HALFWIDTH_mean
Average value the spike halfwidth will take

double SPIKE_HALFWIDTH_stdev
Standard deviation applied to the mean

double TAU_MEMBRANE_mean
Average value of the tau membrane

double TAU_MEMBRANE_stdev
standard deviation applied to the mean

double R_MEMBRANE_mean
Average value of the R membrane

double R_MEMBRANE_stdev
Standard deviation from the mean

double THRESHOLD_mean
Average value when threshold takes place

double THRESHOLD_stdev
Standard deviation from the mean

double LEAK_REVERSAL_mean
Average value the leak reversal will start at

double LEAK_REVERSAL_stdev
Standard deviation from the mean

double VMREST
voltage membrane at rest

double VMREST_stdev
standard deviation from the mean

double LEAK_CONDUCTANCE_mean
Average value the leak conductance will take (g_leak)

double LEAK_CONDUCTANCE_stdev
Standard deviation from the mean

double CalciumInternal_mean
Average value Calucium Internal

double CalciumInternal_stdev
Standard deviation from the mean

double CalciumExternal_mean
Average value of Calcium External

double CalciumExternal_stdev
Standard deviation from the mean

double CalciumSpikeIncrement_mean
Average value of Calcium Spike Increment

double CalciumSpikeIncrement_stdev
Standard deviation from the mean

double Calcium_Tau_mean
Average value of Calcium Tau

double Calcium_Tau_stdev
Standard deviation from the mean

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