\relax 
\bibstyle{plain}
\citation{Neuronal}
\@writefile{toc}{\contentsline {chapter}{\numberline {1}Implementation of a Biologically Realistic Parallel Neocortical-Neural Network Simulator}{1}}
\@writefile{lof}{\addvspace {10\p@ }}
\@writefile{lot}{\addvspace {10\p@ }}
\@writefile{toc}{\contentsline {section}{\numberline {1}Introduction}{1}}
\citation{gwm:opfadogiasitn}
\citation{biophysics}
\citation{hmcj:kcrospidohpn}
\citation{mb:pnn}
\@writefile{toc}{\contentsline {section}{\numberline {2}Biological and Computational Motivations}{2}}
\@writefile{toc}{\contentsline {subsection}{\numberline {2.1}Biological Topology}{2}}
\citation{smt:aafmnrpbopapsst}
\@writefile{toc}{\contentsline {subsection}{\numberline {2.2}Computational Topology}{3}}
\@writefile{toc}{\contentsline {section}{\numberline {3}Object-Oriented Design}{3}}
\citation{ieee:dsl}
\@writefile{toc}{\contentsline {section}{\numberline {4}Simulator Implementation}{5}}
\@writefile{toc}{\contentsline {subsection}{\numberline {4.1}Overview}{5}}
\citation{ieee:petri}
\@writefile{toc}{\contentsline {subsection}{\numberline {4.2}Control Flow Implementation}{6}}
\citation{mpi:book}
\citation{mpi:pacheco}
\citation{mpi:ref}
\@writefile{toc}{\contentsline {subsection}{\numberline {4.3}MPI and Communication}{8}}
\@writefile{lof}{\contentsline {figure}{\numberline {1}{\ignorespaces Communication Model}}{8}}
\newlabel{fig:comm-model}{{1}{8}}
\citation{hmcj:kcrospidohpn}
\citation{Neuronal}
\citation{gwm:opfadogiasitn}
\citation{smt:aafmnrpbopapsst}
\@writefile{toc}{\contentsline {section}{\numberline {5}Results, Conclusions, and Future Work}{9}}
\bibdata{/staff/fredh/papers/bibdir/parallel,paper}
\@writefile{lof}{\contentsline {figure}{\numberline {2}{\ignorespaces Brain Time (in seconds) on a dual processor shared memory machine}}{10}}
\newlabel{fig:ponderosa}{{2}{10}}
\@writefile{lof}{\contentsline {figure}{\numberline {3}{\ignorespaces Brain Time (in seconds) on our Beowulf Cluster}}{10}}
\newlabel{fig:cluster}{{3}{10}}
\bibcite{ieee:petri}{1}
\bibcite{ieee:dsl}{2}
\bibcite{mpi:book}{3}
\bibcite{gwm:opfadogiasitn}{4}
\bibcite{hmcj:kcrospidohpn}{5}
\bibcite{biophysics}{6}
\bibcite{Neuronal}{7}
\bibcite{mb:pnn}{8}
\bibcite{mpi:pacheco}{9}
\bibcite{smt:aafmnrpbopapsst}{10}
\bibcite{mpi:ref}{11}
\@writefile{toc}{\contentsline {chapter}{Bibliography}{11}}