struct T_CELL

Intermediate structure for brain cell.

LOCATOR L

general information

int nCmp

number of compartments defined in this cell

LIST* CmpNames

linked list structure holding information on compartments that will make up this cell

char** Labels

array of unique labels assigned to the resulting compartments created from templates

int* Cmp

array of indexes into the compartment template array

double* Xpos

array of x coordinates for each compartment

double* Ypos

array of y coordinates for each compartment

double* Zpos

array of z coordinates for each compartment

double* Rpos

array of R values - not used but kept to for compatability for now

int nConnect

The number of compartment connections within the cell

T_CMPCONNECT* CnList

Linked List of Connection objects

T_CMPCONNECT** Connect

Array of Connections.

T_CMPCONNECT*** forwardConn

Each compartment in this cells will have a list of connections it collects info from

T_CMPCONNECT*** reverseConn

Each compartment in this cell will have a list of connections for data in reverse

int* nforward

array of reverse connection counts for individual compartments

int* nreverse

array of forward connection counts for individual compartments

Documentation

Intermediate structure for brain cell. Contains information on compartment instances that make up this cell. Many fields in this object are filled after the input file has been completely parsed. Once all the compartments are accounted for, the linked lists are converted to arrays of pointers. These pointers point to the entries in the linked list to make random access possible whereas using only the linked list would force traversing the list to move back and forth between items.

LOCATOR L

general information

int nCmp

number of compartments defined in this cell

LIST* CmpNames

linked list structure holding information on compartments that will make up this cell

char** Labels

array of unique labels assigned to the resulting compartments created from templates

int* Cmp

array of indexes into the compartment template array

double* Xpos

array of x coordinates for each compartment

double* Ypos

array of y coordinates for each compartment

double* Zpos

array of z coordinates for each compartment

double* Rpos

array of R values - not used but kept to for compatability for now

int nConnect

The number of compartment connections within the cell

T_CMPCONNECT* CnList

Linked List of Connection objects

T_CMPCONNECT** Connect

Array of Connections. The array is built after the input file is completely parsed.

T_CMPCONNECT*** forwardConn

Each compartment in this cells will have a list of connections it collects info from

T_CMPCONNECT*** reverseConn

Each compartment in this cell will have a list of connections for data in reverse

int* nforward

array of reverse connection counts for individual compartments

int* nreverse

array of forward connection counts for individual compartments

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