Augmentation Provide a Synapse with additional parameters controlling facilitation.
Brain This is the core of the brain.
Cell The Cell object is simply a container for the compartments that make up the cell.
Channel Models the channels that are present in the cell membrane - specifically the Sodium (Na), Calcium (Ca), and Potassium (K) channels.
CircleList Encapsulate an array to act as a circular list
Compartment The compartment is where the actual computation of cell activity takes place.
MessageBus This defines the organization of the message sending buffers.
NodeInfo This holds a collection of information mostly related to the capabilities of the various nodes the program is running on, used for load balancing, program control, etc.
Output This handles actually writing the report info to output.
Random Encapsule the functions from the book "Numercial Recipes in C" 'Minimal' random number generator of Park and Miller with Bays-Durham shuffle and added safeguards.
Report This module handles the gathering of data for a particular report into a buffer.
Synapse The Synapse object is the receiving end of a connection between cells.
SynapseDef This holds the data that makes up the definition of a synapse type.

Enums, Unions, Structs

ARRAYS Structure to hold pointers to data created from input file.
CmpVoltage encapsulate a double, so that it can change later with minimal fuss
LIST Object to be used as node in a linked list.
LOCATOR This struct is a sub-structure of all elements that are read from the input.
SENDITEM This structure holds the information that specifies the destination of a synapse firing.
T_ANYTHING A generic structure
T_BRAIN Intermediate Brain Object.
T_CELL Intermediate structure for brain cell.
T_CHANNEL Intermediate channel structure.
T_CMP Intermediate compartment object.
T_CMPCONNECT Structure for connecting compartments within a cell.
T_COLUMN Container object to organize layers.
T_CONNECT Information for connections betweens columns, layers, and cells.
T_CSHELL Column shell.
T_LAYER layer object contains cells and cell connections.
T_LSHELL Layer shell object contains spatial information about a layer.
T_RECURRENT Structure to aid in the manipulation of recurrent connections.
T_REPORT Intermediate Report object.
T_SPIKE Spike Shape for an active compartment firing upon reaching threshold
T_STIMULUS
T_STINJECT Intermediate Stimulus Inject object.
T_SYNAPSE Intermediate Synapse.
T_SYNAUGMENTATION Intermediate aynaptic augmentation object.
T_SYNDATA Deprecated synapse data object.
T_SYNLEARN Intermediate Synapse Learning object.
T_SYNPSG Post Synaptic Waveform
T_SYN_FD Intermediate Synapse Facil/Depr object.

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