Journal Publications

Journal Publications of Frederick C Harris, Jr.


2021

[78] Yan Yan and Frederick C Harris, Jr.
A Survey of Data Clustering for Cancer Subtyping (pdf) (2,009 K)
International Journal of Computers and Their Applications Vol 28, No 2, pg 92-115, June 2021.

[77] Jalal Kiswani, Sergiu Dascalu and Frederick Harris, Jr.
Cloud Computing and Its Applications: A Comprehensive Survey (pdf) (1947 K)
International Journal of Computers and Their Applications Vol 28, No 1, pg 3-24, March 2021.

[76] Frederick C. Harris, Jr., Rui Wu, and Alex Redei
Guest Editorial: Special Issue from ISCA Fall - 2020 SEDE Conference, (pdf) (295 K)
International Journal of Computers and Their Applications Vol 28, No 1, pg 1-2, March 2021.


2020

[75] Alexander Novotny, Rowan Gudmundsson, and Frederick C. Harris, Jr.,
A Unity Framework for Multi-Player VR Applications, (pdf) (8,299 K)
International Journal of Computers and Their Applications Vol 27, No 3, pg 115-121, September 2020.

[74] Steven J. Anbro, Alison J. Szarko, Ramona A. Houmanfar, Amber M. Maraccini, Laura H. Crosswell, Frederick C. Harris, Michelle Rebaleati, and Luka Starmer
Using Virtual Simulations to Assess Situational Awareness and Communication in Medical and Nursing Education: A Technical Feasibility Study (pdf) (441 K)
Journal of Organizational Behavior Management, Vol 40, No 1-2, pg 129-139, 2020
https://doi.org/10.1080/01608061.2020.1746474
Journal Link

[73] Terri Heglar, Andrew Penrose, Austin Yount, Kristine Galek, Yantao Shen, Sergiu M. Dascalu, and Frederick C. Harris, Jr.
A Hardware and Software Prototype of the CTAR All-Star. (pdf) (8,213 K)
International Journal of Computers and Their Applications Vol 27, No 1, pg 45-55, March 2020.

[72] Frederick C. Harris, Jr., Sergiu M. Dascalu, Sharad Sharma, and Rui Wu
Guest Editorial: Special Issue from ISCA Fall - 2019 SEDE Conference, (pdf) (XYZ K)
International Journal of Computers and Their Applications Vol 27, No 1, pg 2-3, March 2020.

[71] Angela Gregory, Chao Chen, Rui Wu, Sarah Miller, Sajjad Ahmad, John W Anderson, Hays Barret, Karl Benedict, Dan Cadol, Sergiu M Dascalu, Donna Delparte, John Erickson, Lynn Fenstermaker, Sarah E Godsey, Frederick C Harris, James P McNamara, John Savickas, Luke Sheneman, Mark Stone and Matthew A Turner
Efficient Model-data Integration for Flexible Modeling, Parameter Analysis & Visualization, and Data Management (pdf) (9,446 K)
Frontiers in Water, 2020
doi: 10.3389/frwa.2020.00002
Journal Link


2019

[70] Rui Wu, Lei Yang, Chao Chen, Sajjad Ahmad, Sergiu M. Dascalu, Frederick C Harris, Jr.
MELPF Version 1: Modeling Error Learning based Post-Processor Framework for Hydrologic Models Accuracy Improvement (pdf) (5,491 K)
Geoscientific Model Development Discussions
Vol 12, Issue 9, pg 4115-4131, Sept 2019.
DOI: 10.5194/gmd-12-4115-2019
Journal Link

[69] Alex Redei, Sergiu Dascalu, and Frederick C. Harris, Jr
A Framework for Virtualizing Joystick Controls in a Flight Simulator Training Environment (pdf) (1,277K)
International Journal of Computers and Their Applications
Vol 26, No 1, pg 20-29, March 2019.

[68] Pattaphol Jirasessakul, Zachary Waller, Paul Marquis, Connor Scully-Allison, Vinh Le, Scotty Strachan, Frederick C. Harris, Jr. & Sergiu M. Dascalu
Simplifying Data Visualization Pipelines with the NRDC-CHORDS Interface (pdf) (1,277K)
International Journal of Computers and Their Applications
Vol 26, No 1, pg 10-19, March 2019.

[67] Frederick C. Harris, Jr., Sergiu M. Dascalu, Sharad Sharma
Guest Editorial: Special Issue from ISCA Fall - 2018 SEDE Conference (pdf) (106K)
International Journal of Computers and Their Applications
Vol 26, No 1, pg 2-3, March 2019.

[66] Frederick C. Harris, Jr., Gordon Lee
Editor's Note (pdf) (xxxK)
International Journal of Computers and Their Applications
Vol 26, No 1, pg 1, March 2019.


2018

[65] Likhitha Ravi, Eric Fritzinger, Sergiu M. Dascalu, Frederick C. Harris, Jr.
AVISTED—Analysis and Visualization Toolset for Environmental Data (pdf) (1,028K)
International Journal of Computers and Their Applications
Vol 25, No 4, pg 153-164, December 2018.

[64] Rui Wu, Connor Scully-Allison, Moinul Hossain Rifat, Jose Painumkal, Sergiu Dascalu, Frederick C Harris, Jr
Virtual Watershed System: A Web-Service-Based Software Package For Environmental Modeling (pdf) (1,055K)
Advances in Science, Technology and Engineering Systems Journal Vol. 3, No. 5, 382-393 (2018).

[63] Connor Scully-Allison, Vinh Le, Eric Fritzinger, Scotty Strachan, Frederick C. Harris, Jr., and Sergiu M. Dascalu
Near Real-time Autonomous Quality Control for Streaming Environmental Sensor Data (pdf) (1,055K)
Procedia Computer Science
Vol 126, pg 1656-1665, 2018.

[62] Connor Scully-Allison, Hannah Munoz, Vinh Le, Scotty Strachan, Eric Fritzinger, Frederick C. Harris, Jr., and Sergiu Dascalu
Advancing Quality Assurance Through Metadata Management: Design and Development of a Mobile Application for the NRDC (pdf) (1,277K)
International Journal of Computers and Their Applications
Vol 25, No 1, pg 20-29, March 2018.

[61] Frederick C. Harris, Jr., Sergiu M. Dascalu, Sharad Sharma
Guest Editorial: Special Issue from ISCA Fall - 2017 SEDE Conference (pdf) (106K)
International Journal of Computers and Their Applications
Vol 25, No 1, pg 2-3, March 2018.

[60] Frederick C. Harris, Jr.
Editor's Note (pdf) (xxxK)
International Journal of Computers and Their Applications
Vol 25, No 1, pg 1, March 2018.


2017

[59] Chase D. Carthen, Vinh Le, Richard Kelley, Tomasz J. Kozubowski, Frederick C. Harris, Jr.
Rewind: An Automatic Music Transcription Web Application (pdf) (1,414K)
International Journal of Computers and Their Applications
Vol 24, No 1, pg 20-30, March 2017.

[58] Frederick C. Harris, Jr., Sergiu M. Dascalu, Yan Shi
Guest Editorial: Special Issue from ISCA Fall - 2016 SEDE Conference (pdf) (105K)
International Journal of Computers and Their Applications
Vol 24, No 1, pg 2-3, March 2017.

[57] Frederick C. Harris, Jr.
Editor's Note (pdf) (xxxK)
International Journal of Computers and Their Applications
Vol 24, No 1, pg 1, March 2017.


2016

[56] Rui Wu, Muhanna Muhanna, Sergiu M. Dascalu, Lee Barford, Frederick C. Harris, Jr
Data Lossless Compression Using Improved GFC Algorithm With Multiple GPUs (pdf) (2,452)
International Journal of Computers and Their Applications
Vol 23, No 4, pg 232-241, December 2016.

[55] Scotty Strachan, Eric P. Kelsey, Renée F. Brown, Sergiu Dascalu, Fred Harris, Graham Kent, Bradley Lyles, Gregory McCurdy, David Slater, and Kenneth Smith
Filling the Data Gaps in Mountain Climate Observatories Through Advanced Technology, Refined Instrument Siting, and a Focus on Gradients (pdf) (2,095)
Mountain Research and Development Vol 36, No 4, pages518-527. November 2016
URL: http://www.bioone.org/doi/full/10.1659/MRD-JOURNAL-D-16-00028.1

[54] Chase Carthen, Thomas J. Rushton, Nolan P. Burfield, Christine M. Johnson, Aaron Hesson, Daniel Nielson, Bryan Worrell, Donna Delparte, Tucker Chapman, W. Joel Johansen, Roger Lew, Nicholas R. Wood, Mathew Ziegler, John W. Anderson, Sergiu M Dascalu, Frederick C. Harris, Jr
Virtual Watershed Visualization for the WC-WAVE Project (pdf) (47,084)
International Journal of Computers and Their Applications
Vol 23, No 3, pg 195, September 2016.

[53] Juli Petereit, Sebastian Smith, Frederick C. Harris Jr., and Karen A. Schlauch
petal: Co-expression network modelling in R (pdf) (1,869K)
BMC Systems Biology
Vol 10 (Suppl 2), paper 51 (15 pages) DOI 10.1186/s12918-016-0298-8

[52] Gareth B. Ferneyhough, Corey M. Thibealut, Sergiu M. Dascalu and Frederick C. Harris Jr.
ModFossa: A library for modeling ion channels using Python (pdf) (1,037K)
Journal of Bioinformatics and Computational Biology
Vol. 14, No. 3 (June 2016) 1642003 (16 pages) DOI: 10.1142/S0219720016420038

[51] Damien Ennis, Sergiu M. Dascalu, Frederick C. Harris, Jr.
Leveraging Clustering Techniques to Facilitate Metagenomic Analysis (pdf) (375K)
Intelligent Automation and Soft Computting (Autosoft)
Vol 22, No 1, (2016) pp 153-165. DOI:10.1080/10798587.2015.1073887

[50] Gongzhu Hu, Takaaki Goto, Frederick C Harris, Jr., Yan Shi, Wenying Feng
Guest Editorial: Special Issue from ISCA Fall-2015 Conferences (pdf) (127K)
International Journal of Computers and Their Applications
Vol 23, No 1, pg 2-3, March 2016.

[49] Frederick C. Harris, Jr.
Editor's Note (pdf) (xxxK)
International Journal of Computers and Their Applications
Vol 23, No 1, pg 1, March 2016.


2015

[48] E. Michael Nussbaum, Marissa C. Owens, Gale M. Sinatra, Abeera P. Rehmat, Jacqueline Cordova, Sajjad Ahmad, Frederick C. Harris, Jr., and Sergiu M. Dascalu
Losing the Lake: Simulations to Promote Gains in Student Knowledge & Interest About Climate Change (pdf) (1,347 K)
International Journal of Environmental and Science Education
Vol 10, No 6, pg 789-811, December 2015.

[47] Ivan Gibbs, Frederick C. Harris, Jr, and Sergiu M. Dascalu
A Seperation-Based UI Architecture with a DSL for Role Specialization (pdf) (3,710 K)
Journal of Systems and Software
Vol 101, pg 69-85 March 2015.

[46] Frederick C. Harris, Jr.
Editor's Note (pdf) (xxxK)
International Journal of Computers and Their Applications
Vol 22, No 1, pg 1, March 2015.


2014

[45] Benjamin J. Lucchesi, Dwight D. Egbert, and Frederick C. Harris, Jr,
A Parallel Linear Octree Collision Detection Algorithm (pdf) (2,042 K)
International Journal of Computers and Their Applications
Vol 21, No 4, pg 230-243, December 2014.

[44] Beifang Yi, Xusheng Wang, Frederick C. Harris, Jr, and Sergiu M. Dascalu
sEditor: a Prototype for a Sign Language Interfacing System (pdf) (1,246 K)
IEEE Transactions on Human-Machine Systems
Vol 44, No 4, pg 499-510, Aug 2014

[43] Corey M. Thibeault, Frederick C. Harris, Jr., and Narayan Srinivasa
Using Games to Embody Spiking Neural Networks for Neuromorphic Hardware (pdf) (3,806 K)
International Journal of Computers and Their Applications
Vol 21, No 1, pg 40-53, March 2014.

[42] Frederick C. Harris, Jr.
Editor's Note (pdf) (xxxK)
International Journal of Computers and Their Applications
Vol 21, No 1, pg 1, March 2014.


2013

[41] Roger V. Hoang, Devyani Tanna, Laurence C. Jayet Bray, Sergiu M. Dascalu, and Frederick C. Harris, Jr.
A Novel CPU/GPU Simulation Environment for Large-Scale Biologically Realistic Neural Modeling (pdf) (1,920K)
Frontiers in Neuroinformatics
Vol 7, Article 19.

[40] Damien Ennis, Ann Medaille, Theodore Lambert, Richard Kelley, and Frederick C. Harris, Jr
A Comparison of Academic Libraries: An Analysis Using a Self-Organizing Map (pdf) (664K)
Performance Measurement and Metrics
Vol 14, No 2, pp 118-131.

[39] Alexander Jones, Justin Cardoza, Denver J. Liu, Laurence C. Jayet Bray, Sergiu M. Dascalu, Sushil J. Louis, and Frederick C. Harris, Jr.
A novel 3D visualization tool for large-scale neural networks (pdf) (860 K)
BMC Neuroscience, 14(Suppl 1):158

[38] Corey Michael Thibeault, Kirill Minkovich, Michael John O'Brien, Frederick C Harris, Jr., and Narayan Srinivasa
Efficiently passing messages in distributed spiking neural network simulation (pdf) (2,591K)
Frontiers in Computational Neuroscience
Vol 7, Article 77, June 2013.

[37] Laurence C Jayet Bray, Gareth B Ferneyhough, Corey M Thibeault, Devyani Tanna, Emily R Barker, and Frederick C Harris, Jr.
Reward-Based Learning for Virtual Neurorobotics Through Emotional Speech Processing (pdf) (2,695K)
Frontiers in Neurorobotics
Vol 7, Article 8, April 2013.

[36] Frederick C. Harris, Jr.
Editor's Note (pdf) (xxxK)
International Journal of Computers and Their Applications
Vol 20, No 1, pg 1, March 2013.


2012

[35] Frederick C. Harris, Jr., Jeffrey L. Krichmar, Hava T. Siegelmann, Hiroaki Wagatsuma
Guest Editorial: Biologically Inspired Human-Robot Interactions-Developing More Natural Ways to Communicate with our Machines (pdf) (100K)
IEEE Transactions on Autonomous Mental Development,
Vol 4, No 3, pp 190-191, September 2012.

[34] Laurence C Jayet Bray, Emily R Barker, Gareth B Ferneyhough, Roger V Hoang, Bobby D Bryant, Sergiu M Dascalu, and Frederick C Harris Jr.
Goal-related navigation of a neuromorphic virtual robot (pdf) (126 K)
BMC Neuroscience,
2012, 13(Suppl 2):O3

[33] Laurence C. Jayet Bray, Sridhar R. Anumandla, Corey M. Thibeault, Roger V. Hoang, Philip H. Goodman, Sergiu M. Dascalu, Bobby D. Bryant, and Frederick C. Harris, Jr.
Real-time human-robot interaction underlying neurorobotic trust and intent recognition. (pdf) (837 K)
Neural Networks,
32:130-137, 2012.


2011

[32] William E. Brandstetter III, Joseph D. Mahsman, Cody J. White, Sergiu M. Dascalu, and Frederick C. Harris, Jr.
Multi-Resolution Deformation in Out-of-Core Terrain Rendering (pdf) (533 K)
International Journal of Computers and Their Applications
Vol 18, issue 4, December, 2011.

[31] R.C. Motwani, M.C. Motwani, and F.C. Harris, Jr.
Watermarking of Space Curves using Wavelet Decomposition (pdf) (1,051 K)
International Journal of Computers and Their Applications
Vol 18, issue 4, pages 234-242, December, 2011.

[30] Gordon Lee, Fei Hu, and Frederick C. Harris, Jr.
Guest Editor's Notes (pdf) (xxx K)
International Journal of Computers and Their Applications
Vol 18, issue 4, pages 234-242, December, 2011.

[29] Bei Yuan, Eelke Folmer, Frederick C. Harris, Jr.
Game Accessibility: a Survey (pdf) (1117 K)
Universal Access in the Information Society
Vol 10, issue 1, March, 2011.


2010

[28] Roger V Hoang, Matthew R Sgambati, Timothy J Brown, Daniel S Coming, Frederick C Harris, Jr.
VFire: Immersive Wildfire Simulation and Visualization (pdf) (1,067 K)
Computers and Graphics
Special Issue on Serious Games, December 2010, Vol 34, No 6, pages 655-664.

[27] Laurence C Bray Jayet, Mathias Quoy, Philip H Goodman, Frederick C Harris
A Circuit-Level Model of Hippocampal Place Field Dynamics Modulated by Entorhinal Grid and Suppression-Generating Cells (pdf) (3,393 K)
Frontiers in Neural Circuits
Vol 4, Article 122, November 2010.

[26] Mukesh Motwani, Rakhi Motwani, and Frederick C. Harris, Jr.,
Fragile Watermarking of 3D Models using Genetic Algorithms, (pdf) (602 K)
Journal of Electronic Science and Technology (JEST)
Vol 8, No 3, September 2010, pp 244-250.

[25] Rakhi Motwani, Mukesh Motwani, Frederick C Harris, Jr., and Sergiu M Dascalu
An Eigen-Normal Approach For 3D Mesh Watermarking Using Support Vector Machines (pdf) (469 K)
Journal of Electronic Science and Technology (JEST)
Vol 8, No 3, September 2010, pp 237-243.

[24] Mukesh Motwani, Rakhi Motwani, and Frederick C Harris, Jr.
Parametric Evaluation of Video Motion Tracking Data Sets (pdf) (312 K)
Journal of Electronic Science and Technology (JEST)
Vol 8, No 3, September 2010, pp 215-222.

[23] Corey M. Thibeault, Frederick C Harris, Jr., Philip H Goodman
Breaking the virtual barrier: real-time interactions with spiking neural models (pdf) (187K)
BMC Neuroscience
Vol 11, Supp 1, pp 73-74.

[22] Joshua M. Hegie, Andrew S. Kimmel, Kelvin H. Parian, Sergiu M. Dascalu, Frederick C. Harris, Jr.
WiELD-CAVE: Wireless Ergonomic Lightweight Device for use in the CAVE (pdf) (631 K)
Journal of Computational Methods in Science and Engineering (JCMSE)
Vol 10, Supp 2, 2010, pp 177-186.

[21] David T. Brown, Roger V. Hoang, Matthew R. Sgambati Timothy J. Brown, Sergiu M. Dascalu, Frederick C. Harris, Jr.
An Application for Tree Detection Using Satellite Imagery and Vegetation Data (pdf) (1,115 K)
Journal of Computational Methods in Science and Engineering (JCMSE)
Vol 10, Supp 1, 2010, pp 13-25.


2008

[20] Adrienne Breland, Sara Nasser, Karen Schlauch, Monica Nicolescu, Frederick C. Harris, Jr.
Efficient Influenza A Virus Origin Detection (pdf) (362 K)
Journal of Electronics and Computer Science
Vol. 10, No 2, December, 2008, pgs 1-12.


2007

[19] Romain Brette, Michelle Rudolph, Ted Carnevale, Michael Hines, David Beeman, James M. Bower, Markus Diesmann, Abigail Morrison, Philip H. Goodman, Frederick C. Harris, Jr., Milind Zirpe, Thomas Natschlager, Dejan Pecevski, Bard Ermentrout, Mikael Djurfeldt, Anders Lansner, Olivier Rochel, Thierry Vieville, Eilif Muller, Andrew P. Davison, Sami El Boustani and Alain Destexhe
Simulation of networks of spiking neurons: A review of tools and strategies (pdf) (5,398 K)
Journal of Computational Neuroscience
Vol. 23, December, 2007, pgs 349-398.

[18] William R. Sherman, Simon Su, Philip A. McDonald, Yi Mu, Frederick Harris, Jr.
Open-source Tools for Immersive Environmental Visualization (pdf) (1,778 K)
IEEE Computer Graphics and Applications
Vol. 27, No. 2, March/April 2007, pp 88-91.

[17] Vert, G., Harris, F., Nasser, S.,
Spatial Data Authentication Using Mathematical Visualization., (pdf) (94K)
International Journal of Computer Science and Network Security,
Vol. 7, No. 1, pp 267-274. January 2007.

[16] Vert, G., Harris, F., Nasser, S.,
Modeling Changes in States of Computer Systems for Security., (pdf) (XXXK)
International Journal of Computer Science and Network Security,
Vol. 7, No. 1, pp. 293-297. January 2007.


2006

[15] Beifang Yi, Frederick C. Harris, Jr., Sergiu M. Dascalu, and Ali Erol
User Interface Aspects of a Human-Hand Simulation System (pdf) (601K)
Journal of Systems, Cybernetics, and Informatics,
Vol. 3, No. 5, 2006


2005

[14] Beifang Yi, Frederick C. Harris, Jr., Ling Wang, and Yusing Yan
Real-Time Natural Hand Gestures (pdf) (688K)
Computing in Science and Engineering,
Vol. 7, No. 3, May/June 2005, pp. 92-97.


2004

[13] Ripplinger MC, Wilson CJ, King JG, Frye J, Drewes R, Harris FC, and Goodman PH
Computational Model of Interacting Brain Networks (pdf) (?K)
Journal of Investigative Medicine,
Vol. 52, No. 1, Jan 2004, pp. S155.

[12] Bei Yuan, Sean C. Martin, Judith R. Fredrickson, and Frederick C. Harris, Jr.,
A Generic Queuing System for Computationally Intensive Problems (pdf) (480K)
Congr. Numer.,
Vol. 171, (2004), pp. 193-206.

[11] Judith R. Fredrickson, Bei Yuan, and Frederick C. Harris, Jr.,
A Time Saving Region Restriction for Calculating the Crossing Number (pdf) (387K)
Congr. Numer.,
Vol. 168, (2004), pp. 145-158.

[10] Brian T. Westphal, Frederick C. Harris, Jr., and Sergiu M. Dascalu
Snippets: Support for Drag-and-Drop Programming in the Redwood Environment (pdf) (567K)
in Journal of Universal Computer Science
Vol. 10, No. 7, (2004), pp 859-871

[9] Brian T. Westphal, Frederick C. Harris, Jr., and Sergiu M. Dascalu
Redwood: A Visual Environment for Software Design and Implementation (pdf) (443K)
in Transactions on Computers
Vol. 3, No. 2, April 2004 pp 380-386,

[8] Juan C. Macera, Philip H Goodman, Frederick C. Harris, Jr., Rich Drews, and James B. Maciokas
Remote-Neocortex Control of Robotic Search and Threat Identification (pdf) (565K),
Robotics and Autonomous Systems,
Vol. 46, No. 2, February 2004, pp 97-110.


2000

[7] Pingyan Tan and Frederick C. Harris, Jr.,
A Low-Cost Algorithm for Multicast Routing, (pdf) (172K)
Congr. Numer.,
Vol. 145 (2000), p. 81-96.


1999

[6] Frederick C. Harris, Jr.,
Steiner Minimal Trees: Their Computational Past, Present, and Future, (pdf) (285K)
J. Combin. Math. Combin. Comput.
Vol. 30 (1999), pp. 195-220.


1996

[5] John T. Thorpe and Frederick C. Harris, Jr.,
A Parallel Stochastic Optimization Algorithm for Finding Mappings of the Rectilinear Minimal Crossing Problem, (pdf) (200K),
Ars Comb.,
Vol. 43 (1996), pp. 135-148.


1995

[4] Frederick C. Harris, Jr.,
An Introduction to Steiner Minimal Trees on Grids, (pdf) (182K)
Congr. Numer.,
Vol. 111 (1995), pp. 3-17.

[3] Jean E. Dunbar, Frederick C. Harris, Jr., Sandra M. Hedetniemi, Stephen T. Hedetniemi, Alice A. McRae, and Renu C. Laskar,
Nearly Perfect Sets in Graphs, (pdf) (236K)
Discrete Math.,
Vol. 138 (1995), pp. 229-246.


1994

[2] Frederick C. Harris, Jr.,
A Stochastic Optimization Algorithm for Steiner Minimal Trees, (pdf) (197K)
Congr. Numer.,
Vol. 105 (1994), pp. 54-64.


1992

[1] Robert Geist, A. Jefferson Offutt, and Frederick C. Harris, Jr.,
Estimation and Enhancement of Real-Time Software Reliability Through Mutation Analysis, (pdf)(267K)
IEEE Trans. on Comp.,
Special Issue on Fault-Tolerant Computing, Vol. 41, No. 5 (1992), pp. 550-558.